Citations
We're now using an web-based database to store and maintain references. If you are interested in helping us maintain and add to the reference list (all done on-line) please contact us. We also have the ability to tag references (perhaps with topics), and we may implement this feature for public display in the future.
List
View page 1 2- Savill, N. J., D. C. Hoyle, and P. G. Higgs. 2001. RNA sequence evolution with secondary structure constraints: Comparison of substitution rate models using maximum-likelihood methods. Genetics 157:399-411.
- Smith, A. D., T. W. H. Lui, and E. R. M. Tillier. 2004. Empirical models for substitution in ribosomal RNA. Molecular Biology and Evolution 21:419-427.
- Strope, C. L., S. D. Scott, and E. N. Moriyama. 2007. indel-Seq-Gen: A new protein family simulator incorporating domains, motifs, and indels. Molecular Biology and Evolution 24:640-649.
- Washietl, S., and I. L. Hofacker. 2004. Consensus folding of alighned sequences as a new measure for the detection fo functional RNAs by comparative genomics. Journal of Molecular Biology 342:19-30.
- Wheeler, W. C. 1999. Fixed character states and the optimization of molecular sequence data. Cladistics: the international journal of the Willi Hennig Society 15:379-385.
- Wuyts, J., P. De Rijk, Y. Van de Peer, G. Pison, P. Rousseeuw, and R. De Wachter. 2000. Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA. Nucleic Acids Research 28:4698-4708.